Browse of TCMCG007C30863 protein

CDS

Accession Number	TCMCG007C30863
gbkey	CDS
Protein Id	XP_009143805.1
Location	join(5843356..5843510,5843758..5843921,5844414..5844537,5844616..5844712,5844801..5844868,5844955..5846848,5846927..5847031,5847125..5847184)
Gene	LOC103867482
GeneID	103867482
Organism	Brassica rapa

Protein

Length	888aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009145557.3
Definition	protein SCAR1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	S
Description	regulation of actin nucleation
KEGG_TC	-
KEGG_Module	M00168        [VIEW IN KEGG] M00170        [VIEW IN KEGG] M00171        [VIEW IN KEGG] M00172        [VIEW IN KEGG] M00173        [VIEW IN KEGG] M00346        [VIEW IN KEGG] M00374        [VIEW IN KEGG]
KEGG_Reaction	R00345        [VIEW IN KEGG]
KEGG_rclass	RC02741        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG]
KEGG_ko	ko:K01595        [VIEW IN KEGG]
EC	4.1.1.31        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00620        [VIEW IN KEGG] ko00680        [VIEW IN KEGG] ko00710        [VIEW IN KEGG] ko00720        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko01120        [VIEW IN KEGG] ko01200        [VIEW IN KEGG] map00620        [VIEW IN KEGG] map00680        [VIEW IN KEGG] map00710        [VIEW IN KEGG] map00720        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map01120        [VIEW IN KEGG] map01200        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003779        [VIEW IN EMBL-EBI] GO:0003785        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005856        [VIEW IN EMBL-EBI] GO:0008064        [VIEW IN EMBL-EBI] GO:0008092        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010638        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0030832        [VIEW IN EMBL-EBI] GO:0030833        [VIEW IN EMBL-EBI] GO:0030838        [VIEW IN EMBL-EBI] GO:0031209        [VIEW IN EMBL-EBI] GO:0031334        [VIEW IN EMBL-EBI] GO:0032271        [VIEW IN EMBL-EBI] GO:0032273        [VIEW IN EMBL-EBI] GO:0032535        [VIEW IN EMBL-EBI] GO:0032956        [VIEW IN EMBL-EBI] GO:0032970        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033043        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043254        [VIEW IN EMBL-EBI] GO:0044087        [VIEW IN EMBL-EBI] GO:0044089        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0048518        [VIEW IN EMBL-EBI] GO:0048522        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0051125        [VIEW IN EMBL-EBI] GO:0051127        [VIEW IN EMBL-EBI] GO:0051128        [VIEW IN EMBL-EBI] GO:0051130        [VIEW IN EMBL-EBI] GO:0051493        [VIEW IN EMBL-EBI] GO:0051495        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090066        [VIEW IN EMBL-EBI] GO:0110053        [VIEW IN EMBL-EBI] GO:1902903        [VIEW IN EMBL-EBI] GO:1902905        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCCGCTTGTCAGGGTCGAAGTGAGGAACGTTTACGGTTTAGGTAAAACAGAGCTTCACAGAGACGTCGACCGTGAAGACCCTAAAGCTGTTCTCAATGGCGTCGCCGTTTCTGGACTGGTTGGGATCTTGCGTCAACTTGGTGATCTCACCGAGTTTGCAACAGAGATCTTCCATGGGATACAAGAGGAAGTTATTCTTACATCTTCAAGAAGCAATAAACTGAAGATGAGACTGAAACAGATAGAAACTACTGTTCCTTCAATCCAGAAGGCAGTGCTTGAACAACCAAACCACATACAATTTGCTTACACTGGAGGTCTTGAGTGGCATCCTCGTATACCAAATGTGCAAGATTACTTTGTTTATGACGACTTGCCACAGTTTATCATGGCTCCATATGATGATTGCCGTGATCCTCCACGGTTGCAATTGCTAGACAAGTTTGATATAAATGGTCCAGGGTCTTGTCTCAAACGATACACTGATCCTACTCATTTTAAAAGATCATCAAGAGCTTCTAAACATCCAGTGATTAAGAAGAAGAAATCTTTGCCTAGGAGCCGAGATGTATCGCGTGTTGCCTCAATGGCTAACCAAAGTGACAGGAAGACGTTGACTTCTTTAAGCTTCAGTGGAAGAACCTCTTCCTCTAAAACTGCATCAACTGTGGAAACTGAGTCCAAATCCGACTTGCAAGATCATCGTTCTTGCTCTTTTGATTCGAGAAGTGGTGGAGAGAAACTGAAAGGTGTATATACACCTTCAAGGTTTACACCAGGTCCTCGGACCATTGCTTCAGTTCTGTCTGAAAGTGAGAGTGAAAGTGAAGATGCTACTGATGATAGTCCTTCTCAAGATCTAACACCTCGTGGCTCTTCTTGTGTTAGTTGGCGCGAGAAAGCTGAGATAGTGGAAGCTGATACTCTAAAACTTGAAACAGATGAAGCTCCTGAAGTAATGGAGACTAATGCTGAACTGGAATCAGGACTAAAAGAACATAGAGTGGTTGAAACTGTACAAGATATCACACCAAGGGTAGTGGAAATGGACAGTGAAGATGAAACTGAAAGCGAAGAAGATGATTTTGTTGACGCGCTTTACACCATTGATTCGGAATCTGACAATGACCAAGAGGTTCAGAAGCAAATCTCCAATGAGATTACAGAAGAAGAGTTTGATAACTATGTGTGTGAGAAAGAAACAGAGAATGTTTCGAACAGCTTTGGTCTAGAAGATGAGGCAATGTGTGCTGCTGCATCAGAGCTACATTTATCCTCACCAGTTAGTAAACCTGATGAGATGATTCATCAAGATCCATGGGAGGATTTAGATATGAGCAATGGTACTACTCATAGTTATTCCAATGGCTTCTCAAATCCATTGTATGATACTAATGGTGTTCAAGAACATCAAGAATCAGAAGATGAGAGTTCTTGTGACAACGAAGAAGGGACTCAGTTATGGACTAATGGAAATCTTTTGGGACTGAAGCCATCGAAGCCGGAGATTGAAGAGGAAACCATCAAAGAGACTGATGCTGAAGCCTTGCAAGAGCAGCCCTTGAGAGAAGCTCACAAGGCTGATTTTGACTGGTTTACTTCATCTCCTCAACTTGATCACATGAAAATATCTTTCACTCCCTCAGAAACCTTGCCGAGTTCCGAACTGAAGCTGAAACTTCCAGATGAATACACGTTTTCTTCCTTTCAGTTGGTGCCAGAGACTGGTGGTGGTACTTCACTTCCTGATTCTGATTCAGACAAGGACACTTTCTGTAGAACCTCTTCTTACGTTTCAGATAACAGTGACAATCAATCTGTGTCAATCTCTGAGCAGCAGTCGGATGATGAAAGAAAGAGCCAACAAGAGCTTTATGATGATTCTTTCCACAGAATCAATACTGAAGCTTCTTCTCTCTCAGCTCCCTCTTCACAGTTTGAAACATCAAATGGTTATTTAGCTGGAAAGATCTCTTACCTCCAGAATCCAGCTGAGCCTTTACCGCCACCTCTCCCTCCGTTACAGTGGATGGTTTCAAAGGTACCATCGGGTAGATTCGAGGATAACAACAAGCAGTCTTTTAAAGACACTCTCACACGCGCATTGGAGCAGAGAAGTTCTTTATCTACAGTCAAGAAAGAAGAATCAAACAATGTCACTGCTTATGATCCTAAGCCAGATAACAACAAGCAGTCTTTTAAGGAGACTCTCACACGCGCATTGGAGCAGAGAAGTTATTTATCTACGGTCAAGAAAGAAGAACCAAACAATATCATTACTTATGATCCTAAACCAGATAACAACAAGCAGTCTTTTAAGGACACTCTCACACGCGCATTGGAGCAGAGGAGTTCTTTATCTATGATCAAGAAAGAAGAATCAAACAGTGTCATTGCCTATGATACTAAACCAGAGAACAATGTGAGGGATTATAAGCAAAGTCATGGCAATGTAAAAGAGACAGAAGCTGGAGACTTCTTGCATCAAATCCGAACGAAACAATTTACCTTGAGACGTGTGGTCACTACAAAGGCATCATCATCAGAAGCTACGATGAACACCAACTTCAGTGTGATTCTAGAGAAGGCAAACTCCATCCGACAGGCTGTTGCAAACGACGATGGAGATGGCGAAAGCGATACATGGAGCGATAGCGACACCTGA

Protein:   MPLVRVEVRNVYGLGKTELHRDVDREDPKAVLNGVAVSGLVGILRQLGDLTEFATEIFHGIQEEVILTSSRSNKLKMRLKQIETTVPSIQKAVLEQPNHIQFAYTGGLEWHPRIPNVQDYFVYDDLPQFIMAPYDDCRDPPRLQLLDKFDINGPGSCLKRYTDPTHFKRSSRASKHPVIKKKKSLPRSRDVSRVASMANQSDRKTLTSLSFSGRTSSSKTASTVETESKSDLQDHRSCSFDSRSGGEKLKGVYTPSRFTPGPRTIASVLSESESESEDATDDSPSQDLTPRGSSCVSWREKAEIVEADTLKLETDEAPEVMETNAELESGLKEHRVVETVQDITPRVVEMDSEDETESEEDDFVDALYTIDSESDNDQEVQKQISNEITEEEFDNYVCEKETENVSNSFGLEDEAMCAAASELHLSSPVSKPDEMIHQDPWEDLDMSNGTTHSYSNGFSNPLYDTNGVQEHQESEDESSCDNEEGTQLWTNGNLLGLKPSKPEIEEETIKETDAEALQEQPLREAHKADFDWFTSSPQLDHMKISFTPSETLPSSELKLKLPDEYTFSSFQLVPETGGGTSLPDSDSDKDTFCRTSSYVSDNSDNQSVSISEQQSDDERKSQQELYDDSFHRINTEASSLSAPSSQFETSNGYLAGKISYLQNPAEPLPPPLPPLQWMVSKVPSGRFEDNNKQSFKDTLTRALEQRSSLSTVKKEESNNVTAYDPKPDNNKQSFKETLTRALEQRSYLSTVKKEEPNNIITYDPKPDNNKQSFKDTLTRALEQRSSLSMIKKEESNSVIAYDTKPENNVRDYKQSHGNVKETEAGDFLHQIRTKQFTLRRVVTTKASSSEATMNTNFSVILEKANSIRQAVANDDGDGESDTWSDSDT